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NI Biomedical Startup Kit 3.0

VERSION 5  Click to view document history
Created on: Jul 22, 2010 4:04 AM by ZJ.Gu - Last Modified:  Aug 23, 2013 12:39 PM by Kelly_R

*Note*

it's official! the LabVIEW Biomedical Toolkit is released!  We are very excited about this new toolkit - it is the result of all several years of hard work by a dedicated team of biomedical enthusiasts here at NI and would not have been possible without all the support we received from you, the LabVIEW community. The tremendous success of the Biomedical Startup Kit on NI Labs gave us the confidence to continue the work on this project and bring it to a level of completeness, performance, and quality that we think will make it a standard tool for LabVIEW users involved in biomedical teaching and research.

 

The new LabVIEW Biomedical Toolkit combines the "executable" and "source code" versions of the previous startup kit and adds so much more. For the executable part, you still could use it for free after installation!

 

For download, please visit https://lumen.ni.com/nicif/us/evaltlktsigproc/content.xhtml

Introduction

 

biomedkit.png

 

biomedkit2.png

 

The Biomedical Startup Kit is a suite of applications for use in the biomedical field. These applications enable you to apply biomedical solutions using National Instruments software, such as LabVIEW, with National Instruments hardware, such as NI Educational Laboratory Virtual Instrumentation Suite II (NI ELVIS II) and DAQ cards. You can use these applications to perform built-in biomedical applications, such as to acquiring, preprocessing, extracting, and analyzing biosignals and biomedical images.

 

The current version is 3.0. This version includes an executable version and a source code version.

 

For more infomration ( including How-To documents and discussions ) and if you have any feedbacks or suggestion, please visit and post in Biomedical User Group.

 

Executable Version

 

Executable version contains the following applications:

 

  • File Format Converter
    • Converts files between different file types such as TDMS, LVM, ABF, MIT-BIH Database, MAT, HL7, ACQ, EMG, aECG and EDF.  MAT files are written by MATLAB®.
  • Biosignal Logger
    • Utilizes analog input channels from National Instruments hardware, such as NI ELVIS II or NI data acquisition (DAQ) hardware, to acquire signals.
    • Saves data in a TDMS file.
  • Online Biosignal Noise Reduction Data Logger
    • Uses adaptive filters to separate a signal, such as an ECG, from a noisy biosignal.
    • Saves data in a TDMS file.
  • ECG Feature Extractor
    • Imports ECG signals from different file types, such as TDMS, LVM, ABF, MIT-BIH Database, MAT, HL7, ACQ, EMG, aECG and EDF.  MAT files are written by MATLAB®.
    • Integrates robust extraction algorithms to detect ECG features, such as the QRS Complex, P wave, and T wave.
    • Supports user-defined algorithms. (This feature requires you to modify the source code of this startup kit.)
    • Exports ECG features to a TDMS file.
  • Heart Rate Variability (HRV) Analyzer
    • Provides a variety of analysis methods for HRV analysis including time domain, frequency domain, joint time-frequency domain, and nonlinear analysis.
    • Supports user-defined analysis methods (This feature requires you to modify the source code of this startup kit.)
    • Generates analysis report files.
  • Analog ECG Generator
    • Utilizes analog output channels from National Instruments hardware, such as NI ELVIS II or NI DAQ hardware, to generate a synthetic ECG signal from a recorded file or from synthetic models.
  • Noninvasive Blood Pressure (NIBP) Analyzer
    • Utilizes analog input channels from National Instruments hardware, such as NI ELVIS II or NI DAQ hardware, to control the NIBP device and acquire pressure signals.
    • Provides the functionality of NIBP analysis for research purposes by using the oscillometric method.
  • 3D Image Reconstructor
    • Reconstructs and visualizes 3D models from 2D 2D medical image slices (supporting BMP, JPG, PNG and DICOM files).

 

You could download the executable version here.

Souce Code Version

 

Souce code version includes all the souce codes of the above applications and a function palette for biomedical signal acquisiton, analysis and visualization.

 

Use the Biomedical VIs and Express VIs located on the Functions»User Libraries palette to create biomedical applications in LabVIEW. These VIs and Express VIs enable you to perform the following functions:

  • ECG and EEG simulation
  • File input, such as loading and converting biosignals from various file types
  • ECG preprocessing
  • ECG feature extraction
  • HRV analysis
  • EMG RMS, mean power frequency (MNF), and median power frequency (MDF) calculations
  • EEG bispectrum and bicoherence analysis
  • Load images from DICOM files
  • Create isosurface from 3D volume data
  • Draw isosurface for 3D picture control

 

Requirements

 

Executable version:

The computer you are using must meet the minimum system requirements to run the Biomedical Startup Kit:

  • Windows 7/Vista/XP
  • LabVIEW 8.6 Runtime Engine
  • DAQmx 8.8

 

Source Code Version:

The computer you are using must meet the minimum system requirements to run the Biomedical Startup Kit Source Code Version:

  • Windows 7/Vista/XP
  • LabVIEW 8.6 Full or Professional Development System or later
  • LabVIEW 8.6 Advanced Signal Processing Toolkit or later
  • LabVIEW 8.6 Digital Filter Design Toolkit or later
  • LabVIEW Adaptive Filter Toolkit 1.0 or later
  • DAQmx 8.8 or later

The computer you are using must meet the minimum system requirements to run the Biomedical Startup Kit SignalExpress example projects:

  • LabVIEW SignalExpress

Note  You can download free, 30-day evaluation versions of National Instruments software from ni.com/downloads/evaluation.htm.

 

 

Installation

 

Complete the following steps to install the Biomedical Startup Kit:

Note  Some virus detection programs interfere with the installer. Disable any automatic virus detection programs before you install. After installation, check your computer for viruses and enable any virus detection programs you disabled.

  1. Log on as an administrator or as a user with administrator privileges.
  2. Extract the files from the .zip file you downloaded.
  3. Run the setup.exe file.
  4. Follow the instructions that appear on the screen after launching the installer.

 

Thanks!

 

ZJ (Zhijun) Gu

National Instruments


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